STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N854_GASACLHFPL tetraspan subfamily member 4b. (184 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin binding family member 2.
   
 
 0.638
G3P7E5_GASAC
Calcium and integrin binding family member 2.
   
 
 0.509
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
  0.505
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
  0.505
G3NLX1_GASAC
Visinin-like 1a.
   
 
  0.495
G3PXB1_GASAC
Calcium and integrin binding family member 3.
     
 0.494
G3N427_GASAC
Uncharacterized protein.
   
 
  0.483
G3PVP7_GASAC
Tetraspanin.
   
  0.483
G3PJB0_GASAC
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  0.477
PCDH9
Protocadherin 9.
   
  0.472
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.