Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N878_GASACChondrolectin. (293 aa)    
Predicted Functional Partners:
G3NNT0_GASAC
Tenascin C.
    
  0.681
G3NYT0_GASAC
Uncharacterized protein.
    
  0.681
G3P5I9_GASAC
Uncharacterized protein.
    
  0.681
G3PKN2_GASAC
Tenascin R (restrictin, janusin).
    
  0.681
G3PKN8_GASAC
Tenascin N.
    
  0.681
G3PTD5_GASAC
Zmp:0000000846.
    
  0.681
G3PSU8_GASAC
Transmembrane protein 41B.
      
 0.672
G3PUP2_GASAC
GC-rich promoter binding protein 1-like 1.
      
 0.531
G3P931_GASAC
Talin 2b.
    
 
 0.460
G3PFT1_GASAC
Talin rod domain containing 1.
    
 
 0.460
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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