STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N8A8_GASACAbraxas 1, BRCA1 A complex subunit. (263 aa)    
Predicted Functional Partners:
G3NY92_GASAC
BRISC and BRCA1 A complex member 1.
    
  0.960
G3NSY0_GASAC
Uncharacterized protein.
    
  0.910
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.656
G3PHP7_GASAC
BRISC and BRCA1 A complex member 2.
    
  0.630
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
    
  0.616
G3PPJ9_GASAC
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.508
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.500
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
    
 0.500
G3PTR5_GASAC
Mitochondrial ribosomal protein S2.
   
  0.477
G3NMD7_GASAC
Mitochondrial ribosomal protein S26.
    
  0.464
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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