STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM43Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
G3NKM6_GASAC
Uncharacterized protein.
    
 0.627
G3N9H9_GASAC
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.587
G3NE82_GASAC
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.575
G3P0L7_GASAC
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.562
G3P8N3_GASAC
Nicalin.
      
 0.530
RRP36
Ribosomal RNA processing 36.
      
 0.527
G3Q390_GASAC
Fas associated factor family member 2.
    
 
 0.525
G3N400_GASAC
Sphingomyelin phosphodiesterase 4.
      
 0.523
G3NR14_GASAC
Si:dkey-243k1.3.
    
 0.516
G3P650_GASAC
UBA domain containing 2.
    
 
 0.516
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.