Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PURBPurine rich element binding protein B. (275 aa)    
Predicted Functional Partners:
G3PNV5_GASAC
Uncharacterized protein.
   
   0.772
G3Q4Y1_GASAC
Zinc finger CCHC-type and RNA binding motif 1.
    
 
 0.641
G3QBA9_GASAC
Replication factor C (activator 1) 3.
    
   0.632
G3NLM0_GASAC
E2F transcription factor 1.
    
 
 0.609
G3Q1J9_GASAC
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.584
G3N5P0_GASAC
Replication factor C (activator 1) 2.
    
   0.566
G3Q7S8_GASAC
La ribonucleoprotein domain family, member 7.
    
   0.560
G3N6Y6_GASAC
RNA binding motif protein 4.2.
    
 
 0.557
G3N6Z2_GASAC
RNA binding motif protein 4.1.
    
 
 0.557
G3Q4I1_GASAC
Fragile X mental retardation 1.
    
 
 0.552
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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