Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N8H3_GASACUncharacterized protein. (188 aa)    
Predicted Functional Partners:
G3N8H5_GASAC
Uncharacterized protein.
 
     0.900
G3PZ97_GASAC
USO1 vesicle transport factor.
   
 0.727
G3PXV3_GASAC
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.697
G3PWI7_GASAC
Golgin A2.
   
 0.693
G3NNW4_GASAC
Intraflagellar transport 20 homolog (Chlamydomonas).
   
 0.659
G3PLZ9_GASAC
Cytoskeleton associated protein 5.
   
 0.653
G3PXW9_GASAC
Ras homolog family member F.
   
  0.648
G3PIW9_GASAC
RAB11a, member RAS oncogene family, like.
   
 0.641
G3PJ21_GASAC
Uncharacterized protein.
   
 0.641
G3PS45_GASAC
Uncharacterized protein.
   
 0.641
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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