Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N8J4_GASACH15 domain-containing protein. (217 aa)    
Predicted Functional Partners:
G3PC16_GASAC
High mobility group box 1b.
    
 0.594
G3PVY2_GASAC
High mobility group box 2a.
    
 0.594
HMGB1
High mobility group box 1.
    
 0.594
G3P2U9_GASAC
H1 histone family, member 0.
   
 0.571
G3N886_GASAC
High mobility group box 2b.
    
 0.557
G3N752_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 
 0.547
G3PNW6_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 
 0.547
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
    
   0.546
G3Q1J9_GASAC
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
  0.541
G3NBD2_GASAC
Uncharacterized protein.
    
 0.537
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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