Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N8L8_GASACWD repeat domain 82. (602 aa)    
Predicted Functional Partners:
G3NJ04_GASAC
Retinoblastoma binding protein 5.
    
 0.988
G3N863_GASAC
Uncharacterized protein.
   
 0.984
G3PEN7_GASAC
CXXC finger protein 1b.
   
 0.984
G3NYA8_GASAC
Cleavage and polyadenylation specific factor 4.
   
 0.980
G3N724_GASAC
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.979
G3Q8S3_GASAC
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.978
WDR33
WD repeat domain 33.
   
 0.977
G3PXW7_GASAC
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.963
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.961
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.961
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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