STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N8M7_GASACHemK methyltransferase family member 1. (329 aa)    
Predicted Functional Partners:
G3PXS4_GASAC
tRNA methyltransferase subunit 11-2.
    
 0.981
G3PKK7_GASAC
Mitochondrial translational release factor 1.
  
 
 0.939
G3N8Q8_GASAC
Mitochondrial translational release factor 1-like.
  
 
 0.934
G3NZY3_GASAC
Si:ch211-275j6.5.
  
 
 0.934
G3PCN1_GASAC
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
 0.934
G3Q4V7_GASAC
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
 0.934
G3P6U3_GASAC
Coproporphyrinogen oxidase.
  
 
 0.882
G3N6B5_GASAC
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.875
G3Q1D7_GASAC
Eukaryotic translation termination factor 1b.
   
 0.862
G3NEY8_GASAC
Threonine aldolase 1.
   
  0.837
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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