STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N8R1_GASACDesumoylating isopeptidase 2. (201 aa)    
Predicted Functional Partners:
G3Q1P8_GASAC
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.771
G3Q6D4_GASAC
Methyltransferase like 3; Belongs to the MT-A70-like family.
   
 
 0.659
G3PFN1_GASAC
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
   
   0.634
G3PUL8_GASAC
Proteasome 26S subunit, ATPase 3.
   
   0.634
G3Q3T1_GASAC
Proteasome 26S subunit, non-ATPase 12.
   
   0.633
G3N556_GASAC
Proteasome subunit alpha type.
    
   0.632
G3NNG5_GASAC
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
    
   0.632
G3NTT6_GASAC
Proteasome subunit alpha type.
    
   0.632
G3NV85_GASAC
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.632
G3PCW4_GASAC
Testis enhanced gene transcript (BAX inhibitor 1); Belongs to the BI1 family.
    
   0.632
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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