STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N8T6_GASACProtein phosphatase 1, regulatory subunit 10. (743 aa)    
Predicted Functional Partners:
G3PDS4_GASAC
Splicing factor 3a, subunit 1.
   
 0.960
G3PR91_GASAC
Splicing factor 3a, subunit 2.
   
 0.960
G3NYT4_GASAC
Splicing factor 3a, subunit 3.
   
 0.955
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.937
G3N4K0_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.918
G3N5H6_GASAC
Uncharacterized protein.
   
 0.918
G3P8Z0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.910
G3PNF0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.910
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
 0.896
G3PFL6_GASAC
RNA binding motif protein 25a.
   
 0.824
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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