Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N8U1_GASACABC transmembrane type-1 domain-containing protein. (303 aa)    
Predicted Functional Partners:
G3NQR6_GASAC
Golgi-associated PDZ and coiled-coil motif containing.
    
 0.656
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.653
G3NQ33_GASAC
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.647
G3PT97_GASAC
Ubiquitin carboxyl-terminal hydrolase.
    
  0.637
G3PBC3_GASAC
Intersectin 2a.
    
 0.623
G3PUV9_GASAC
Intersectin 2b.
    
 0.623
G3P597_GASAC
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.618
SPATA5
Spermatogenesis associated 5.
   
 0.618
G3PX92_GASAC
Spermatogenesis associated 5-like 1.
   
 0.618
G3Q4U8_GASAC
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.618
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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