G3N8U6_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3N8U6_GASAC

Uncharacterized protein. (263 aa)

Predicted Functional Partners:

G3NKE5_GASAC

0.978

G3NH35_GASAC

0.939

il1b

0.888

G3NJ16_GASAC

0.841

G3PYF8_GASAC

0.808

G3N843_GASAC

0.703

G3N846_GASAC

0.703

G3NRA2_GASAC

0.548

G3NEY4_GASAC

0.541

G3PWE3_GASAC

0.541

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N843_GASAC	G3N846_GASAC	ENSGACP00000001477	ENSGACP00000001480	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.847
G3N843_GASAC	G3N8U6_GASAC	ENSGACP00000001477	ENSGACP00000001733	Uncharacterized protein.	Uncharacterized protein.	0.703
G3N843_GASAC	G3NH35_GASAC	ENSGACP00000001477	ENSGACP00000004643	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.998
G3N843_GASAC	G3NJ16_GASAC	ENSGACP00000001477	ENSGACP00000005326	Uncharacterized protein.	Interleukin-1 receptor-associated kinase 4.	0.997
G3N843_GASAC	G3NKE5_GASAC	ENSGACP00000001477	ENSGACP00000005807	Uncharacterized protein.	Uncharacterized protein.	0.902
G3N843_GASAC	G3NRA2_GASAC	ENSGACP00000001477	ENSGACP00000007869	Uncharacterized protein.	SEFIR domain-containing protein.	0.550
G3N843_GASAC	G3PYF8_GASAC	ENSGACP00000001477	ENSGACP00000022648	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.998
G3N843_GASAC	il1b	ENSGACP00000001477	ENSGACP00000019287	Uncharacterized protein.	Interleukin-1.	0.782
G3N846_GASAC	G3N843_GASAC	ENSGACP00000001480	ENSGACP00000001477	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.847
G3N846_GASAC	G3N8U6_GASAC	ENSGACP00000001480	ENSGACP00000001733	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.703
G3N846_GASAC	G3NH35_GASAC	ENSGACP00000001480	ENSGACP00000004643	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.984
G3N846_GASAC	G3NJ16_GASAC	ENSGACP00000001480	ENSGACP00000005326	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Interleukin-1 receptor-associated kinase 4.	0.973
G3N846_GASAC	G3NKE5_GASAC	ENSGACP00000001480	ENSGACP00000005807	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.902
G3N846_GASAC	G3NRA2_GASAC	ENSGACP00000001480	ENSGACP00000007869	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	SEFIR domain-containing protein.	0.550
G3N846_GASAC	G3PYF8_GASAC	ENSGACP00000001480	ENSGACP00000022648	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.988
G3N846_GASAC	il1b	ENSGACP00000001480	ENSGACP00000019287	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Interleukin-1.	0.782
G3N8U6_GASAC	G3N843_GASAC	ENSGACP00000001733	ENSGACP00000001477	Uncharacterized protein.	Uncharacterized protein.	0.703
G3N8U6_GASAC	G3N846_GASAC	ENSGACP00000001733	ENSGACP00000001480	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.703
G3N8U6_GASAC	G3NEY4_GASAC	ENSGACP00000001733	ENSGACP00000003885	Uncharacterized protein.	Corticotropin releasing hormone b.	0.541
G3N8U6_GASAC	G3NH35_GASAC	ENSGACP00000001733	ENSGACP00000004643	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.939