STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N8W4_GASACRetinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)    
Predicted Functional Partners:
G3NRZ9_GASAC
Ig_4 domain-containing protein.
   
 0.935
G3PRP1_GASAC
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 0.892
G3PXC7_GASAC
LRAT domain-containing protein.
  
 0.869
G3Q186_GASAC
Retinoid isomerohydrolase RPE65 a.
   
 
 0.856
G3NGJ7_GASAC
Si:ch1073-13h15.3.
    
 0.852
G3NR77_GASAC
Retinoid isomerohydrolase RPE65 b.
   
 
 0.852
G3P4E2_GASAC
Retinol saturase (all-trans-retinol 13,14-reductase).
    
 0.852
G3PR09_GASAC
Patatin-like phospholipase domain containing 4.
     
 0.848
G3PR78_GASAC
Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 0.847
G3Q4R6_GASAC
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 0.845
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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