STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N8X4_GASACStaufen double-stranded RNA binding protein 1. (715 aa)    
Predicted Functional Partners:
G3Q9N5_GASAC
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 0.929
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.873
G3PS70_GASAC
Uncharacterized protein.
    
 
 0.873
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 
 0.862
G3NSH7_GASAC
Interleukin enhancer binding factor 3b.
    
 
 0.852
G3NK72_GASAC
Eukaryotic translation initiation factor 2-alpha kinase 2.
    
 0.840
G3NK90_GASAC
Eukaryotic translation initiation factor 2-alpha kinase 2.
    
 0.840
G3PJ27_GASAC
G patch domain containing 4.
    
   0.840
G3P2N9_GASAC
Nucleolin.
    
 
 0.835
G3PZM9_GASAC
NFKB repressing factor.
    
   0.820
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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