ENSGACP00000001763 protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSGACP00000001763

annotation not available (154 aa)

Predicted Functional Partners:

G3PFW6_GASAC

0.968

G3Q7J3_GASAC

0.957

G3P8A4_GASAC

0.907

G3Q4V8_GASAC

0.907

G3NHN3_GASAC

0.624

G3Q6T9_GASAC

0.619

RBBP4

0.593

RBBP4-2

0.593

G3PNN8_GASAC

0.593

G3Q2R4_GASAC

0.576

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGACP00000001763	G3NHN3_GASAC	ENSGACP00000001763	ENSGACP00000004842	annotation not available	Chromatin assembly factor 1, subunit B.	0.624
ENSGACP00000001763	G3P8A4_GASAC	ENSGACP00000001763	ENSGACP00000013828	annotation not available	Anti-silencing function 1Ba histone chaperone.	0.907
ENSGACP00000001763	G3PFW6_GASAC	ENSGACP00000001763	ENSGACP00000016490	annotation not available	Calcineurin binding protein 1.	0.968
ENSGACP00000001763	G3PNN8_GASAC	ENSGACP00000001763	ENSGACP00000019221	annotation not available	Retinoblastoma binding protein 4, like.	0.593
ENSGACP00000001763	G3Q2R4_GASAC	ENSGACP00000001763	ENSGACP00000024163	annotation not available	Germ cell nuclear acidic peptidase.	0.576
ENSGACP00000001763	G3Q4V8_GASAC	ENSGACP00000001763	ENSGACP00000024912	annotation not available	Anti-silencing function 1Ba histone chaperone.	0.907
ENSGACP00000001763	G3Q6T9_GASAC	ENSGACP00000001763	ENSGACP00000025599	annotation not available	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.619
ENSGACP00000001763	G3Q7J3_GASAC	ENSGACP00000001763	ENSGACP00000025853	annotation not available	UBN_AB domain-containing protein.	0.957
ENSGACP00000001763	RBBP4	ENSGACP00000001763	ENSGACP00000008799	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.593
ENSGACP00000001763	RBBP4-2	ENSGACP00000001763	ENSGACP00000011435	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.593
G3NHN3_GASAC	ENSGACP00000001763	ENSGACP00000004842	ENSGACP00000001763	Chromatin assembly factor 1, subunit B.	annotation not available	0.624
G3NHN3_GASAC	G3P8A4_GASAC	ENSGACP00000004842	ENSGACP00000013828	Chromatin assembly factor 1, subunit B.	Anti-silencing function 1Ba histone chaperone.	0.947
G3NHN3_GASAC	G3PNN8_GASAC	ENSGACP00000004842	ENSGACP00000019221	Chromatin assembly factor 1, subunit B.	Retinoblastoma binding protein 4, like.	0.894
G3NHN3_GASAC	G3Q4V8_GASAC	ENSGACP00000004842	ENSGACP00000024912	Chromatin assembly factor 1, subunit B.	Anti-silencing function 1Ba histone chaperone.	0.947
G3NHN3_GASAC	RBBP4	ENSGACP00000004842	ENSGACP00000008799	Chromatin assembly factor 1, subunit B.	RB binding protein 4, chromatin remodeling factor.	0.894
G3NHN3_GASAC	RBBP4-2	ENSGACP00000004842	ENSGACP00000011435	Chromatin assembly factor 1, subunit B.	RB binding protein 4, chromatin remodeling factor.	0.894
G3P8A4_GASAC	ENSGACP00000001763	ENSGACP00000013828	ENSGACP00000001763	Anti-silencing function 1Ba histone chaperone.	annotation not available	0.907
G3P8A4_GASAC	G3NHN3_GASAC	ENSGACP00000013828	ENSGACP00000004842	Anti-silencing function 1Ba histone chaperone.	Chromatin assembly factor 1, subunit B.	0.947
G3P8A4_GASAC	G3PFW6_GASAC	ENSGACP00000013828	ENSGACP00000016490	Anti-silencing function 1Ba histone chaperone.	Calcineurin binding protein 1.	0.979
G3P8A4_GASAC	G3PNN8_GASAC	ENSGACP00000013828	ENSGACP00000019221	Anti-silencing function 1Ba histone chaperone.	Retinoblastoma binding protein 4, like.	0.826