ENSGACP00000001765 protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSGACP00000001765

annotation not available (375 aa)

Predicted Functional Partners:

G3N9I3_GASAC

0.892

G3PNJ4_GASAC

0.871

G3NWQ0_GASAC

0.859

G3PGT0_GASAC

0.834

G3P6G7_GASAC

0.833

WDR1

0.827

G3N9S6_GASAC

0.822

G3PPX2_GASAC

0.822

G3N6U1_GASAC

0.820

G3NTF7_GASAC

0.820

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGACP00000001765	G3N6U1_GASAC	ENSGACP00000001765	ENSGACP00000001016	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.820
ENSGACP00000001765	G3N9I3_GASAC	ENSGACP00000001765	ENSGACP00000001973	annotation not available	Myb-like, SWIRM and MPN domains 1.	0.892
ENSGACP00000001765	G3N9S6_GASAC	ENSGACP00000001765	ENSGACP00000002067	annotation not available	Uncharacterized protein; Belongs to the actin family.	0.822
ENSGACP00000001765	G3NTF7_GASAC	ENSGACP00000001765	ENSGACP00000008625	annotation not available	Dynactin 2 (p50).	0.820
ENSGACP00000001765	G3NWQ0_GASAC	ENSGACP00000001765	ENSGACP00000009769	annotation not available	Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.	0.859
ENSGACP00000001765	G3P6G7_GASAC	ENSGACP00000001765	ENSGACP00000013190	annotation not available	Actin-like 6A; Belongs to the actin family.	0.833
ENSGACP00000001765	G3PGT0_GASAC	ENSGACP00000001765	ENSGACP00000016805	annotation not available	Actin related protein 10; Belongs to the actin family.	0.834
ENSGACP00000001765	G3PNJ4_GASAC	ENSGACP00000001765	ENSGACP00000019177	annotation not available	Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.	0.871
ENSGACP00000001765	G3PPX2_GASAC	ENSGACP00000001765	ENSGACP00000019657	annotation not available	Actin related protein 3; Belongs to the actin family.	0.822
ENSGACP00000001765	WDR1	ENSGACP00000001765	ENSGACP00000012039	annotation not available	WD repeat domain 1.	0.827
G3N6U1_GASAC	ENSGACP00000001765	ENSGACP00000001016	ENSGACP00000001765	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	annotation not available	0.820
G3N6U1_GASAC	G3N9I3_GASAC	ENSGACP00000001016	ENSGACP00000001973	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Myb-like, SWIRM and MPN domains 1.	0.891
G3N6U1_GASAC	G3N9S6_GASAC	ENSGACP00000001016	ENSGACP00000002067	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Uncharacterized protein; Belongs to the actin family.	0.598
G3N6U1_GASAC	G3P6G7_GASAC	ENSGACP00000001016	ENSGACP00000013190	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Actin-like 6A; Belongs to the actin family.	0.995
G3N6U1_GASAC	G3PGT0_GASAC	ENSGACP00000001016	ENSGACP00000016805	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Actin related protein 10; Belongs to the actin family.	0.724
G3N6U1_GASAC	G3PPX2_GASAC	ENSGACP00000001016	ENSGACP00000019657	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	Actin related protein 3; Belongs to the actin family.	0.598
G3N9I3_GASAC	ENSGACP00000001765	ENSGACP00000001973	ENSGACP00000001765	Myb-like, SWIRM and MPN domains 1.	annotation not available	0.892
G3N9I3_GASAC	G3N6U1_GASAC	ENSGACP00000001973	ENSGACP00000001016	Myb-like, SWIRM and MPN domains 1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.891
G3N9I3_GASAC	G3N9S6_GASAC	ENSGACP00000001973	ENSGACP00000002067	Myb-like, SWIRM and MPN domains 1.	Uncharacterized protein; Belongs to the actin family.	0.796
G3N9I3_GASAC	G3P6G7_GASAC	ENSGACP00000001973	ENSGACP00000013190	Myb-like, SWIRM and MPN domains 1.	Actin-like 6A; Belongs to the actin family.	0.929