STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N910_GASACCa2+-dependent activator protein for secretion b. (1333 aa)    
Predicted Functional Partners:
G3Q1M0_GASAC
Leucine rich repeat transmembrane neuronal 1.
   
  
 0.548
RIMS2
Regulating synaptic membrane exocytosis 2.
   
  
 0.485
NSF
N-ethylmaleimide-sensitive factor a.
   
  
 0.482
G3NEW5_GASAC
Inositol polyphosphate-4-phosphatase type I Aa.
   
  
 0.469
PCDH9
Protocadherin 9.
   
    0.451
PPFIA3
PTPRF interacting protein alpha 3.
   
  
 0.434
G3P326_GASAC
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
   
  
 0.417
G3N9Q4_GASAC
Bassoon (presynaptic cytomatrix protein) b.
   
  
 0.413
G3PP93_GASAC
Syntaxin 1B; Belongs to the syntaxin family.
   
 
 0.405
SCN8A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
  
 0.403
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.