STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N933_GASACATP-binding cassette, sub-family F (GCN20), member 1. (833 aa)    
Predicted Functional Partners:
G3Q0K3_GASAC
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.930
G3P5V0_GASAC
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.859
G3Q405_GASAC
ATP-binding cassette, sub-family E (OABP), member 1.
   
 
 0.847
G3NXV2_GASAC
NudC nuclear distribution protein.
   
 
 0.839
G3NF51_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.834
RPL37A
Ribosomal protein L37a.
   
 
 0.829
G3PYS6_GASAC
Developmentally regulated GTP binding protein 1.
   
 
 0.826
G3P1A2_GASAC
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.824
G3P8M4_GASAC
Eukaryotic translation initiation factor 5B.
  
 
 0.812
G3PCI2_GASAC
Ribosomal protein L18.
   
 
 0.793
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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