STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N949_GASACMetabolism of cobalamin associated D. (293 aa)    
Predicted Functional Partners:
G3PNN9_GASAC
Metabolism of cobalamin associated C.
    
 0.982
G3PPZ7_GASAC
Zgc:92335.
  
  
 
0.903
G3PRI7_GASAC
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.877
G3NDT4_GASAC
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
     
 0.872
G3Q8D5_GASAC
Zgc:101765.
    
 0.855
G3Q8E1_GASAC
Zgc:101765.
    
 0.855
G3Q8E8_GASAC
Zgc:101765.
    
 0.855
G3PL39_GASAC
Zgc:110366.
    
 0.792
G3PYR0_GASAC
Metabolism of cobalamin associated A.
      
 0.726
G3PFG5_GASAC
Methylmalonyl CoA mutase.
   
  
 0.684
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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