STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N962_GASACSyntaxin 12; Belongs to the syntaxin family. (272 aa)    
Predicted Functional Partners:
G3NBN1_GASAC
V-SNARE domain-containing protein.
   
 0.992
G3NKG4_GASAC
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
   
 0.992
G3Q6U9_GASAC
Syntaxin 8.
   
 0.984
G3PK50_GASAC
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.974
G3PFD9_GASAC
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.971
G3Q3X5_GASAC
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
   
 0.947
G3PRQ7_GASAC
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 
 0.945
G3N4N2_GASAC
Syntaxin 10.
    
 0.932
G3PJ55_GASAC
Syntaxin 6.
    
 0.932
G3PFQ4_GASAC
N-ethylmaleimide-sensitive factor attachment protein, beta b.
   
 0.930
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.