Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHB2Prohibitin. (309 aa)    
Predicted Functional Partners:
G3P388_GASAC
Prohibitin.
   
 0.999
G3QA13_GASAC
Complement component 1, q subcomponent binding protein.
   
 0.993
G3PCB2_GASAC
ARFGEF family member 3.
    
 
 0.981
G3PRY8_GASAC
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.970
G3P5A8_GASAC
Ubiquinol-cytochrome c reductase core protein 1.
  
 0.969
G3Q733_GASAC
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
 0.969
G3N3Z7_GASAC
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.964
G3NFR5_GASAC
Microtubule-associated protein 1 light chain 3 beta.
   
 0.964
G3NBV8_GASAC
GABA(A) receptor-associated protein like 2.
   
 0.961
G3PZT6_GASAC
Uncharacterized protein.
   
 0.961
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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