Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N979_GASACRibosomal RNA processing 1. (655 aa)    
Predicted Functional Partners:
G3NKP9_GASAC
Ribosomal L1 domain containing 1.
   
 
 0.994
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
 
 0.994
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.993
G3PVZ2_GASAC
Brix domain containing 2.
   
 
 0.993
G3N7W3_GASAC
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.992
G3N9N6_GASAC
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.992
G3P5A5_GASAC
Ribosome production factor 1 homolog.
   
 
 0.991
G3NM70_GASAC
WD repeat domain 74.
   
 
 0.990
G3NUK0_GASAC
EBNA1 binding protein 2.
   
 
 0.990
G3P7T7_GASAC
Nucleolar complex protein 3 homolog.
   
 
 0.990
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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