STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N993_GASACPbx/knotted 1 homeobox 1.1. (449 aa)    
Predicted Functional Partners:
G3PI69_GASAC
Pre-B-cell leukemia homeobox 2.
   
0.795
G3NIP3_GASAC
Homeobox domain-containing protein.
    
0.769
G3P708_GASAC
Pre-B-cell leukemia transcription factor 4.
   
0.769
G3PE55_GASAC
Homeobox domain-containing protein.
    
 0.769
G3PJE8_GASAC
Pre-B-cell leukemia homeobox 1a.
    
0.769
G3Q4L4_GASAC
Homeobox domain-containing protein.
    
0.769
G3NQ21_GASAC
Homeobox B1a.
    
 0.744
G3NIK8_GASAC
Homeobox B1a.
    
 0.696
G3NW49_GASAC
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.667
G3P372_GASAC
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.667
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.