STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N993_GASACPbx/knotted 1 homeobox 1.1. (449 aa)    
Predicted Functional Partners:
G3NQ21_GASAC
Homeobox B1a.
    
 0.848
G3NIK8_GASAC
Homeobox B1a.
    
 0.799
G3PI69_GASAC
Pre-B-cell leukemia homeobox 2.
   
 0.792
G3NIP3_GASAC
Homeobox domain-containing protein.
    
 0.779
G3P708_GASAC
Pre-B-cell leukemia transcription factor 4.
    
 0.779
G3PE55_GASAC
Homeobox domain-containing protein.
    
 0.779
G3PJE8_GASAC
Pre-B-cell leukemia homeobox 1a.
    
 0.779
G3Q4L4_GASAC
Homeobox domain-containing protein.
    
 0.779
G3NQ18_GASAC
Homeobox B2a.
    
 0.708
G3Q214_GASAC
Negative regulator of ubiquitin-like proteins 1.
   
   0.689
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.