STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9C1_GASACTruB pseudouridine (psi) synthase family member 2. (332 aa)    
Predicted Functional Partners:
G3NHV1_GASAC
Tyrosine--tRNA ligase.
  
 
 0.980
G3NYJ7_GASAC
Neugrin, neurite outgrowth associated.
    
 0.980
G3QCF0_GASAC
RCC1 like.
   
 0.980
G3PQU4_GASAC
FAST_1 domain-containing protein.
   
 0.970
G3PQU6_GASAC
RAP domain-containing protein.
   
 0.970
G3PVG6_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
  
 
 0.960
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.940
G3NP91_GASAC
Mitochondrial transcription termination factor 3.
   
 0.933
G3P227_GASAC
NOP56 ribonucleoprotein homolog.
   
 
 0.930
G3NYJ3_GASAC
tRNA pseudouridine synthase.
  
 0.921
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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