STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9C1_GASACTruB pseudouridine (psi) synthase family member 2. (332 aa)    
Predicted Functional Partners:
G3P227_GASAC
NOP56 ribonucleoprotein homolog.
   
 
 0.978
G3Q520_GASAC
NOP10 ribonucleoprotein homolog (yeast).
   
 0.977
G3NJV1_GASAC
Fibrillarin.
   
 
 0.972
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.972
G3PDD7_GASAC
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 0.967
G3P8M4_GASAC
Eukaryotic translation initiation factor 5B.
  
 
 0.919
G3QCK6_GASAC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.917
G3Q8W2_GASAC
Mitochondrial translational initiation factor 2.
  
 
 0.916
G3NN85_GASAC
SRP40_C domain-containing protein.
   
 
 0.911
G3P4V7_GASAC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.911
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.