STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9C8_GASACGeneral transcription factor IIH, polypeptide 4. (348 aa)    
Predicted Functional Partners:
G3PIW9_GASAC
RAB11a, member RAS oncogene family, like.
    
 
 0.687
G3PJ21_GASAC
Uncharacterized protein.
    
 
 0.687
G3PS45_GASAC
Uncharacterized protein.
    
 
 0.687
G3NMK6_GASAC
RAB25, member RAS oncogene family a.
    
 
 0.625
G3PFY0_GASAC
RAB, member of RAS oncogene family-like 2.
    
 
 0.625
G3PIU0_GASAC
RAB25, member RAS oncogene family b.
    
 
 0.625
RNF146
Ring finger protein 146.
    
 
 0.444
G3P0Q6_GASAC
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.408
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.