Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N9C8_GASACGeneral transcription factor IIH, polypeptide 4. (348 aa)    
Predicted Functional Partners:
G3P0Q6_GASAC
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.670
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.633
G3Q8N1_GASAC
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
  
 0.633
RNF146
Ring finger protein 146.
    
 
 0.629
G3PIW9_GASAC
RAB11a, member RAS oncogene family, like.
    
 
 0.605
G3PJ21_GASAC
Uncharacterized protein.
    
 
 0.605
G3PS45_GASAC
Uncharacterized protein.
    
 
 0.605
G3NMB0_GASAC
ANTXR cell adhesion molecule 1c.
      
 0.487
G3PY79_GASAC
ANTXR cell adhesion molecule 1b.
      
 0.487
G3NCJ9_GASAC
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.469
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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