STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9D1_GASACCoiled-coil domain containing 93. (619 aa)    
Predicted Functional Partners:
G3PJ61_GASAC
Coiled-coil domain containing 22.
    
 
 0.964
COMMD10
COMM domain containing 10.
    
 
 0.924
G3QCG9_GASAC
VPS26 endosomal protein sorting factor C.
   
 
 0.913
G3NAT3_GASAC
COMM domain containing 6.
   
 
 0.903
G3Q4G0_GASAC
COMM domain containing 5.
   
 
 0.896
G3NBQ5_GASAC
COMM domain containing 2.
    
 
 0.895
G3NLK9_GASAC
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.888
G3NLF4_GASAC
COMM domain containing 4.
   
 
 0.876
G3PIG8_GASAC
COMM domain containing 8.
    
 
 0.876
G3NMI0_GASAC
VPS35 endosomal protein sorting factor like.
    
 
 0.875
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.