STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9E6_GASACUncharacterized protein. (176 aa)    
Predicted Functional Partners:
G3PSB8_GASAC
Uncharacterized protein.
    
 0.931
G3Q2R8_GASAC
Centrin, EF-hand protein, 2.
    
 0.929
G3PWT4_GASAC
Centrin 4.
    
 0.928
G3N9E2_GASAC
Uncharacterized protein.
 
      0.881
G3PGW2_GASAC
CDP-L-ribitol pyrophosphorylase A.
    
 0.863
G3NW76_GASAC
Serine/threonine-protein kinase PLK.
    
 0.717
G3PKU2_GASAC
Serine/threonine-protein kinase PLK.
    
 0.717
PLK1
Serine/threonine-protein kinase PLK.
    
 0.717
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.673
G3PHX5_GASAC
Cramped chromatin regulator homolog 1.
      
 0.673
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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