STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9F7_GASACZgc:112163. (271 aa)    
Predicted Functional Partners:
G3N6N7_GASAC
CWF19 like cell cycle control factor 1.
      
 0.785
G3PMB2_GASAC
Replication factor C (activator 1) 5.
      
 0.712
G3PXB0_GASAC
Nucleoporin 155.
      
 0.694
G3P7M6_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 36.
      
 0.677
G3Q5W2_GASAC
Tartrate-resistant acid phosphatase type 5.
      
 0.670
G3NUJ6_GASAC
Phospholipase C, epsilon 1.
      
 0.642
G3PB97_GASAC
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
      
 0.642
G3PP78_GASAC
Chaperonin containing TCP1, subunit 2 (beta).
      
 0.577
G3PTW9_GASAC
Ubiquitin carboxyl-terminal hydrolase.
      
 0.549
G3PW74_GASAC
Ubiquitin carboxyl-terminal hydrolase.
      
 0.549
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.