STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9G8_GASACUncharacterized protein. (128 aa)    
Predicted Functional Partners:
G3N465_GASAC
Nucleoporin 210.
     
 0.756
G3NHQ4_GASAC
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
     
 0.669
G3NB37_GASAC
Nucleoporin 98.
     
 0.472
G3NDN5_GASAC
Si:ch211-216l23.2.
     
 0.472
G3NPG2_GASAC
Nuclear receptor coactivator 5.
     
 0.472
G3QC27_GASAC
POM121 transmembrane nucleoporin.
     
 0.472
G3NYD9_GASAC
Folate receptor.
      
 0.449
G3NZS9_GASAC
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
     
 0.447
G3PF71_GASAC
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
     
 0.446
G3N6B3_GASAC
Sulfatase modifying factor 1.
      
 0.445
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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