STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N9H3_GASACArginine-glutamic acid dipeptide (RE) repeats b. (1176 aa)    
Predicted Functional Partners:
G3NJ04_GASAC
Retinoblastoma binding protein 5.
    
 
 0.867
G3NLN5_GASAC
Nuclear receptor subfamily 2, group E, member 3.
    
 0.792
G3P2J0_GASAC
Nuclear receptor subfamily 2, group E, member 1.
    
 0.792
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.792
G3PX75_GASAC
FAT atypical cadherin 2.
    
 0.763
G3Q2D7_GASAC
WD repeat domain 5.
    
   0.760
G3PXG4_GASAC
FAT atypical cadherin 1a.
    
 0.756
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.683
G3N5G3_GASAC
FAT atypical cadherin 3a.
    
 0.666
G3QBG4_GASAC
FAT atypical cadherin 3b.
    
 0.666
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.