STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9H3_GASACArginine-glutamic acid dipeptide (RE) repeats b. (1176 aa)    
Predicted Functional Partners:
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
  0.827
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
  0.827
G3PX75_GASAC
FAT atypical cadherin 2.
    
 0.748
G3PXG4_GASAC
FAT atypical cadherin 1a.
    
 0.748
G3N5G3_GASAC
FAT atypical cadherin 3a.
    
 0.727
G3QBG4_GASAC
FAT atypical cadherin 3b.
    
 0.727
G3NLN5_GASAC
Nuclear receptor subfamily 2, group E, member 3.
    
 0.706
G3P2J0_GASAC
Nuclear receptor subfamily 2, group E, member 1.
    
 0.706
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.706
G3NM42_GASAC
E1A binding protein p300 a.
   
 0.664
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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