Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
G3N9H7_GASACUpstream binding transcription factor, like. (706 aa)    
Predicted Functional Partners:
G3PUD8_GASAC
RNA polymerase I subunit E.
    
 0.944
G3Q4N9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.917
G3NF51_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.873
G3Q5K8_GASAC
Sirtuin 7.
    
 
 0.859
G3N9C2_GASAC
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
   
 0.830
G3NKC6_GASAC
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.818
G3N6V1_GASAC
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.772
G3NDH4_GASAC
NudC domain containing 1.
   
   0.766
G3N606_GASAC
Microspherule protein 1.
   
 0.757
G3P9V2_GASAC
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.755
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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