STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9H9_GASACKelch repeat and BTB (POZ) domain containing 12. (620 aa)    
Predicted Functional Partners:
G3PWM5_GASAC
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.726
G3NXV8_GASAC
Tetratricopeptide repeat domain 8.
    
 0.721
G3NNH8_GASAC
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.687
G3NJ72_GASAC
TPR_REGION domain-containing protein.
    
 0.664
G3NE82_GASAC
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.662
G3PK47_GASAC
UBX domain protein 7.
    
  0.653
G3P3Q0_GASAC
5'-nucleotidase, cytosolic IAa.
   
 0.644
G3N5R5_GASAC
NBR1 autophagy cargo receptor b.
    
 0.631
G3NHQ0_GASAC
NBR1 autophagy cargo receptor a.
    
 0.631
RRP36
Ribosomal RNA processing 36.
      
 0.631
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.