STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N9I1_GASACTransmembrane and ubiquitin-like domain containing 1. (257 aa)    
Predicted Functional Partners:
G3Q0A6_GASAC
Ring finger protein 170.
    
 
 0.711
G3NUA6_GASAC
ER lipid raft associated 1.
    
 
 0.700
G3PIX9_GASAC
Cholesterol 25-hydroxylase like 3.
    
 
 0.700
G3P4W7_GASAC
Transmembrane and ubiquitin-like domain containing 2.
  
 
 
0.670
G3N406_GASAC
Uncharacterized protein.
    
 0.652
G3NHI1_GASAC
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.652
G3PJA6_GASAC
Transmembrane protein 259.
    
 
 0.583
G3PXT7_GASAC
Ring finger protein 185.
   
 
 0.544
RNF5
Ring finger protein 5.
    
 
 0.543
G3Q8C8_GASAC
Zgc:77929.
      
 0.525
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.