Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N9I1_GASACTransmembrane and ubiquitin-like domain containing 1. (257 aa)    
Predicted Functional Partners:
G3Q0A6_GASAC
Ring finger protein 170.
    
 
 0.966
G3P4W7_GASAC
Transmembrane and ubiquitin-like domain containing 2.
    
   0.938
G3NUA6_GASAC
ER lipid raft associated 1.
    
 
 0.936
G3PIX9_GASAC
Cholesterol 25-hydroxylase like 3.
    
 
 0.936
G3PJA6_GASAC
Transmembrane protein 259.
    
 
 0.926
RNF5
Ring finger protein 5.
    
 
 0.918
G3PXT7_GASAC
Ring finger protein 185.
    
 
 0.918
G3Q8C8_GASAC
Zgc:77929.
      
 0.810
G3Q1Z5_GASAC
Transmembrane protein 126A.
      
 0.698
G3NTN2_GASAC
RIC3 domain-containing protein.
   
   0.680
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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