G3N9X0_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3N9X0_GASAC

Uncharacterized protein. (231 aa)

Predicted Functional Partners:

G3PMS1_GASAC

0.873

G3NB78_GASAC

0.856

G3Q352_GASAC

0.845

G3PGT0_GASAC

0.829

G3N7W0_GASAC

0.827

G3NTF7_GASAC

0.820

G3P3G3_GASAC

0.799

G3P8P8_GASAC

0.799

G3PE85_GASAC

0.799

PTK7

0.733

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N7W0_GASAC	G3N9X0_GASAC	ENSGACP00000001394	ENSGACP00000002112	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.827
G3N7W0_GASAC	G3NB78_GASAC	ENSGACP00000001394	ENSGACP00000002574	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin related protein 1, centractin.	0.979
G3N7W0_GASAC	G3NTF7_GASAC	ENSGACP00000001394	ENSGACP00000008625	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Dynactin 2 (p50).	0.986
G3N7W0_GASAC	G3P3G3_GASAC	ENSGACP00000001394	ENSGACP00000012136	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	MET proto-oncogene, receptor tyrosine kinase.	0.487
G3N7W0_GASAC	G3P8P8_GASAC	ENSGACP00000001394	ENSGACP00000013972	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Macrophage stimulating 1 receptor a.	0.487
G3N7W0_GASAC	G3PE85_GASAC	ENSGACP00000001394	ENSGACP00000015909	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Macrophage stimulating 1 receptor b.	0.487
G3N7W0_GASAC	G3PGT0_GASAC	ENSGACP00000001394	ENSGACP00000016805	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Actin related protein 10; Belongs to the actin family.	0.979
G3N7W0_GASAC	G3PMS1_GASAC	ENSGACP00000001394	ENSGACP00000018904	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Dynactin 5.	0.975
G3N7W0_GASAC	G3Q352_GASAC	ENSGACP00000001394	ENSGACP00000024302	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Dynactin 4.	0.985
G3N9X0_GASAC	G3N7W0_GASAC	ENSGACP00000002112	ENSGACP00000001394	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.827
G3N9X0_GASAC	G3NB78_GASAC	ENSGACP00000002112	ENSGACP00000002574	Uncharacterized protein.	Actin related protein 1, centractin.	0.856
G3N9X0_GASAC	G3NTF7_GASAC	ENSGACP00000002112	ENSGACP00000008625	Uncharacterized protein.	Dynactin 2 (p50).	0.820
G3N9X0_GASAC	G3P3G3_GASAC	ENSGACP00000002112	ENSGACP00000012136	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.799
G3N9X0_GASAC	G3P8P8_GASAC	ENSGACP00000002112	ENSGACP00000013972	Uncharacterized protein.	Macrophage stimulating 1 receptor a.	0.799
G3N9X0_GASAC	G3PE85_GASAC	ENSGACP00000002112	ENSGACP00000015909	Uncharacterized protein.	Macrophage stimulating 1 receptor b.	0.799
G3N9X0_GASAC	G3PGT0_GASAC	ENSGACP00000002112	ENSGACP00000016805	Uncharacterized protein.	Actin related protein 10; Belongs to the actin family.	0.829
G3N9X0_GASAC	G3PMS1_GASAC	ENSGACP00000002112	ENSGACP00000018904	Uncharacterized protein.	Dynactin 5.	0.873
G3N9X0_GASAC	G3Q352_GASAC	ENSGACP00000002112	ENSGACP00000024302	Uncharacterized protein.	Dynactin 4.	0.845
G3N9X0_GASAC	PTK7	ENSGACP00000002112	ENSGACP00000005294	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.733
G3NB78_GASAC	G3N7W0_GASAC	ENSGACP00000002574	ENSGACP00000001394	Actin related protein 1, centractin.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.979