Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N9Z4_GASACSAM domain and HD domain 1. (609 aa)    
Predicted Functional Partners:
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.938
G3N9Z7_GASAC
HD domain-containing protein.
  
  
 
0.901
G3N9Y5_GASAC
HD domain-containing protein.
  
  
 
0.900
G3NCV5_GASAC
Thymidine kinase 2.
   
 
 0.874
G3PYM2_GASAC
Damage-specific DNA binding protein 1.
    
 
 0.772
G3PWM1_GASAC
Cyclin A2; Belongs to the cyclin family.
    
 
 0.764
G3QBB4_GASAC
Cyclin A1; Belongs to the cyclin family.
    
 
 0.764
G3PTK4_GASAC
Deoxycytidine kinase.
   
 
 0.658
G3NSL9_GASAC
Excision repair cross-complementation group 1.
      
 0.624
G3P0Z5_GASAC
dNK domain-containing protein.
   
 
 0.623
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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