Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA04_GASACLinker histone H1M. (249 aa)    
Predicted Functional Partners:
G3N752_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 
 0.810
G3PNW6_GASAC
Histone H2A; Belongs to the histone H2A family.
   
 
 0.810
G3P6G7_GASAC
Actin-like 6A; Belongs to the actin family.
    
 
 0.801
G3Q7S8_GASAC
La ribonucleoprotein domain family, member 7.
    
   0.763
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
    
   0.762
G3Q3C4_GASAC
Ribosomal protein L26.
    
   0.694
G3NXN9_GASAC
Bromodomain adjacent to zinc finger domain, 1B.
   
 0.693
G3Q530_GASAC
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.685
G3N886_GASAC
High mobility group box 2b.
   
 0.597
G3NPN2_GASAC
DNA fragmentation factor, beta polypeptide (caspase-activated DNase).
    
 0.597
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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