Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA14_GASACRas suppressor protein 1. (267 aa)    
Predicted Functional Partners:
G3NIF7_GASAC
Parvin, gamma.
   
 0.991
G3NUM3_GASAC
LIM domain-containing protein.
   
 0.981
G3PRB2_GASAC
LIM domain-containing protein.
   
 0.981
ILK
Integrin linked kinase.
  
 0.968
G3QBG8_GASAC
Uncharacterized protein.
  
 0.968
G3NGP9_GASAC
Parvin, alpha a.
   
 0.940
G3NIF0_GASAC
Parvin, beta.
   
 0.940
G3PDB7_GASAC
Uncharacterized protein.
   
 0.929
G3NDH4_GASAC
NudC domain containing 1.
    
   0.880
G3NDR2_GASAC
AlkB homolog 6.
      
 0.841
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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