Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA19_GASACHTH La-type RNA-binding domain-containing protein. (582 aa)    
Predicted Functional Partners:
G3Q227_GASAC
Receptor for activated C kinase 1.
    
 
 0.796
G3PT97_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.564
G3QAF6_GASAC
Zinc finger CCCH-type containing 12B.
      
 0.550
G3NSL2_GASAC
Ataxin 2.
   
 
 0.546
G3N6A9_GASAC
Filamin C, gamma b (actin binding protein 280).
    
   0.545
FLNB
Filamin B.
    
   0.545
G3P738_GASAC
Filamin C, gamma a (actin binding protein 280).
    
   0.545
G3PI97_GASAC
Uncharacterized protein.
    
   0.545
G3PIA8_GASAC
Uncharacterized protein.
    
   0.545
G3PHC9_GASAC
HECT domain containing 1.
   
   0.505
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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