STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NA25_GASACtRNA-yW synthesizing protein 5. (279 aa)    
Predicted Functional Partners:
G3P327_GASAC
Leucine carboxyl methyltransferase 2.
 
    
 0.930
G3PZ82_GASAC
tRNA methyltransferase 12 homolog.
 
    
 0.769
G3P393_GASAC
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
 
    
 0.721
G3NED0_GASAC
Uncharacterized protein.
    
 0.720
hif-1a
Uncharacterized protein.
    
 0.720
G3P4J9_GASAC
Neuronal PAS domain protein 1.
    
 0.720
G3PBW9_GASAC
Endothelial PAS domain protein 1b.
    
 0.720
G3PIK9_GASAC
Hypoxia inducible factor 1 subunit alpha, like.
    
 0.720
G3NEB1_GASAC
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
    
   0.587
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.587
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.