Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NA25_GASACtRNA-yW synthesizing protein 5. (279 aa)    
Predicted Functional Partners:
G3P327_GASAC
Leucine carboxyl methyltransferase 2.
 
    
 0.951
G3P8E1_GASAC
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.894
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
 0.862
G3PZ82_GASAC
tRNA methyltransferase 12 homolog.
 
    
 0.823
G3P393_GASAC
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
 
    
 0.756
G3PGQ0_GASAC
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
      
 0.732
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.725
G3NKK6_GASAC
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.723
G3NA50_GASAC
Zgc:153521.
      
 0.715
G3PNX6_GASAC
tRNA-yW synthesizing protein 3 homolog (S. cerevisiae).
      
 0.711
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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