Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NA26_GASACMitochondrial poly(A) polymerase. (552 aa)    
Predicted Functional Partners:
G3NIM8_GASAC
SKICH domain-containing protein.
    
 
 0.958
G3PN71_GASAC
G-rich RNA sequence binding factor 1.
    
 0.912
G3PHC9_GASAC
HECT domain containing 1.
   
   0.781
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.708
G3Q9N7_GASAC
SRA stem-loop interacting RNA binding protein.
    
 0.703
G3NE42_GASAC
Symplekin.
   
 0.679
G3NE18_GASAC
Poly(A) polymerase gamma.
   
 
 0.673
G3NE21_GASAC
Uncharacterized protein.
   
 
 0.673
G3NS21_GASAC
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.673
G3P1Y1_GASAC
Cleavage and polyadenylation specific factor 1.
    
 0.648
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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