Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NA38_GASACIntermediate filament family orphan 2b; Belongs to the intermediate filament family. (444 aa)    
Predicted Functional Partners:
G3NGT8_GASAC
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
      0.879
G3NA42_GASAC
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
      
 0.769
G3NA48_GASAC
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
      
 0.715
VAMP3
Vesicle associated membrane protein 3.
    
   0.607
G3NAX4_GASAC
Transcription factor 19 (SC1), like.
      
 0.587
G3NWR5_GASAC
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
      
 0.553
G3P782_GASAC
Zgc:92912.
    
   0.546
G3QAA3_GASAC
Vesicle-associated membrane protein 2.
    
   0.546
G3P361_GASAC
Trichoplein, keratin filament binding.
    
   0.493
G3P057_GASAC
Peroxisome proliferator-activated receptor delta b.
      
 0.471
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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