Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA43_GASACWW domain containing adaptor with coiled-coil a. (543 aa)    
Predicted Functional Partners:
G3P1X9_GASAC
E3 ubiquitin protein ligase.
   
 0.925
G3Q1K5_GASAC
E3 ubiquitin protein ligase.
   
 0.925
G3PFL6_GASAC
RNA binding motif protein 25a.
   
 0.924
G3PJW5_GASAC
RNA binding motif protein 25b.
   
 0.924
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
    
 
 0.856
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
   
 
 0.856
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.844
G3N5K7_GASAC
Small nuclear ribonucleoprotein 70 (U1).
    
 
 0.832
G3QBM3_GASAC
Small nuclear ribonucleoprotein 35 (U11/U12).
    
 
 0.832
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
   0.816
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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