G3NA47_GASAC protein (Gasterosteus aculeatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Score

G3NA47_GASAC

Uncharacterized protein. (266 aa)

Predicted Functional Partners:

G3P1E3_GASAC

0.442

DMD

0.442

G3PZ19_GASAC

0.442

G3P2I5_GASAC

0.421

LMOD3

0.402

G3NSA9_GASAC

0.402

G3P1L3_GASAC

0.402

G3PJY5_GASAC

0.402

G3PQA0_GASAC

0.402

G3Q3Y3_GASAC

0.402

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMD	G3NA47_GASAC	ENSGACP00000020025	ENSGACP00000002189	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Uncharacterized protein.	0.442
DMD	G3NSA9_GASAC	ENSGACP00000020025	ENSGACP00000008226	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Leiomodin 1b (smooth muscle).	0.453
DMD	G3P2I5_GASAC	ENSGACP00000020025	ENSGACP00000011808	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Titin-cap (telethonin).	0.482
DMD	G3PJY5_GASAC	ENSGACP00000020025	ENSGACP00000017915	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Tropomodulin 4 (muscle).	0.524
DMD	G3PQA0_GASAC	ENSGACP00000020025	ENSGACP00000019785	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Tropomodulin 2.	0.507
DMD	G3Q3Y3_GASAC	ENSGACP00000020025	ENSGACP00000024585	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	Tropomodulin 1.	0.494
G3NA47_GASAC	DMD	ENSGACP00000002189	ENSGACP00000020025	Uncharacterized protein.	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	0.442
G3NA47_GASAC	G3NSA9_GASAC	ENSGACP00000002189	ENSGACP00000008226	Uncharacterized protein.	Leiomodin 1b (smooth muscle).	0.402
G3NA47_GASAC	G3P1E3_GASAC	ENSGACP00000002189	ENSGACP00000011416	Uncharacterized protein.	Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	0.442
G3NA47_GASAC	G3P1L3_GASAC	ENSGACP00000002189	ENSGACP00000011486	Uncharacterized protein.	Leiomodin 2 (cardiac) a.	0.402
G3NA47_GASAC	G3P2I5_GASAC	ENSGACP00000002189	ENSGACP00000011808	Uncharacterized protein.	Titin-cap (telethonin).	0.421
G3NA47_GASAC	G3PJY5_GASAC	ENSGACP00000002189	ENSGACP00000017915	Uncharacterized protein.	Tropomodulin 4 (muscle).	0.402
G3NA47_GASAC	G3PQA0_GASAC	ENSGACP00000002189	ENSGACP00000019785	Uncharacterized protein.	Tropomodulin 2.	0.402
G3NA47_GASAC	G3PZ19_GASAC	ENSGACP00000002189	ENSGACP00000022859	Uncharacterized protein.	Dystrophin related protein 2.	0.442
G3NA47_GASAC	G3Q3Y3_GASAC	ENSGACP00000002189	ENSGACP00000024585	Uncharacterized protein.	Tropomodulin 1.	0.402
G3NA47_GASAC	LMOD3	ENSGACP00000002189	ENSGACP00000004499	Uncharacterized protein.	Leiomodin 3.	0.402
G3NSA9_GASAC	DMD	ENSGACP00000008226	ENSGACP00000020025	Leiomodin 1b (smooth muscle).	Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	0.453
G3NSA9_GASAC	G3NA47_GASAC	ENSGACP00000008226	ENSGACP00000002189	Leiomodin 1b (smooth muscle).	Uncharacterized protein.	0.402
G3NSA9_GASAC	G3P1E3_GASAC	ENSGACP00000008226	ENSGACP00000011416	Leiomodin 1b (smooth muscle).	Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.	0.453
G3NSA9_GASAC	G3P2I5_GASAC	ENSGACP00000008226	ENSGACP00000011808	Leiomodin 1b (smooth muscle).	Titin-cap (telethonin).	0.453