Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LAMC2Laminin subunit gamma 2. (1155 aa)    
Predicted Functional Partners:
G3NJI9_GASAC
Laminin, beta 2 (laminin S).
   
 0.953
G3NXC7_GASAC
Laminin, beta 1a.
   
 0.953
G3NJJ9_GASAC
Laminin EGF-like domain-containing protein.
   
 0.948
G3Q9F2_GASAC
Laminin, beta 1b.
   
 0.948
G3PCM1_GASAC
Uncharacterized protein.
   
 0.940
LAMA2
Laminin subunit alpha 2.
   
 0.907
G3PBZ4_GASAC
Link domain-containing protein.
    
 0.903
G3NMX5_GASAC
Integrin beta.
   
 0.873
G3NSW4_GASAC
Laminin, alpha 4.
   
 0.863
G3P856_GASAC
Laminin, alpha 5.
   
 0.863
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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