STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NA55_GASACAconitase 1, soluble; Belongs to the aconitase/IPM isomerase family. (894 aa)    
Predicted Functional Partners:
G3P9W8_GASAC
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
G3Q7Q6_GASAC
Malate synthase-like.
  
 0.977
G3P3D2_GASAC
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.975
G3PLU4_GASAC
F-box and leucine-rich repeat protein 5.
    
 0.958
G3P9S4_GASAC
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.957
G3PVW5_GASAC
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.957
G3PXW2_GASAC
SUMO peptidase family member, NEDD8 specific.
  
 
 0.956
G3P339_GASAC
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.922
G3NSD2_GASAC
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.916
ACLY
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.916
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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