Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA58_GASACMultiple EGF-like-domains 6b. (1537 aa)    
Predicted Functional Partners:
G3PYL7_GASAC
MCF.2 cell line derived transforming sequence a.
    
 0.745
G3NUC2_GASAC
HMG box domain containing 4a.
      
 0.713
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
    
 0.705
G3NTM5_GASAC
WD repeat containing, antisense to TP73.
    
 
 0.644
G3PCG8_GASAC
Uncharacterized protein.
    
 0.617
G3NAE3_GASAC
Si:ch211-113g11.6; Belongs to the semaphorin family.
     
 0.594
G3PYA3_GASAC
Ligand of numb-protein X 2b.
    
 
 0.583
G3P5S8_GASAC
Calpain 12; Belongs to the peptidase C2 family.
    
 
 0.582
G3QAX3_GASAC
MCF.2 cell line derived transforming sequence b.
    
 0.581
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.580
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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