STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NA68_GASACPotassium voltage-gated channel, shaker-related subfamily, beta member 2 a. (417 aa)    
Predicted Functional Partners:
G3Q8B7_GASAC
Nucleoporin 133.
   
 0.843
G3N7X6_GASAC
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.835
G3NK12_GASAC
Potassium voltage-gated channel, shaker-related subfamily, member 1a; Belongs to the potassium channel family.
   
 0.822
G3PF71_GASAC
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.810
G3NHQ4_GASAC
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.806
G3P4W3_GASAC
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
    
 0.793
G3NNJ8_GASAC
Potassium voltage-gated channel, shaker-related subfamily, member 2a; Belongs to the potassium channel family.
   
 0.758
KCNA2
Potassium voltage-gated channel subfamily A member 2; Belongs to the potassium channel family.
   
 0.758
G3P7U6_GASAC
Potassium voltage-gated channel, subfamily H (eag-related), member 5a.
    
 0.758
G3PA54_GASAC
Potassium voltage-gated channel, subfamily H (eag-related), member 1a.
    
 0.758
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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