Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA77_GASACInterferon regulatory factor 9. (393 aa)    
Predicted Functional Partners:
G3N6I8_GASAC
Signal transducer and activator of transcription.
   
 0.936
G3NDX5_GASAC
Signal transducer and activator of transcription.
   
 0.936
G3P1B5_GASAC
Signal transducer and activator of transcription.
   
 0.936
G3PSI1_GASAC
Signal transducer and activator of transcription.
   
 0.936
G3P3G2_GASAC
Myxovirus (influenza) resistance B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.881
G3P3I0_GASAC
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.881
G3PP14_GASAC
Interferon-induced protein 35.
   
 
 0.841
G3PCG6_GASAC
Ribosomal protein S27a.
   
 0.834
G3Q8U0_GASAC
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
  
 0.826
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.823
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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