Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NA88_GASACPaired box 7a. (519 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.858
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
    
 0.817
SOX10
SRY-box transcription factor 10.
   
 0.786
G3NWH9_GASAC
SRY-box transcription factor 10.
   
 0.785
G3PRH6_GASAC
Cactin.
    
 0.731
G3NQ77_GASAC
SRY-box transcription factor 9a.
   
 0.729
G3PB19_GASAC
SRY-box transcription factor 9b.
   
 0.729
SOX8
SRY-box transcription factor 8.
   
 0.729
G3PZN0_GASAC
Lymphoid enhancer-binding factor 1.
    
 0.726
G3Q3E1_GASAC
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.717
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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